R&D tax relief

The claim came back rejected, or smaller than expected

A number arrives that doesn't match what was claimed, or a letter says the claim isn't accepted at all. Before assuming the underlying work simply didn't qualify, it's worth understanding what HMRC actually objected to, because in a lot of cases that's a narrative or evidence problem, not a technical one.

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The distinction that matters most

A weak claim isn't the same as ineligible work

These get conflated constantly, and the difference decides what happens next. HMRC rejecting or reducing a claim means the material submitted (the technical narrative, the cost breakdown, or both) didn't support what was being claimed to HMRC's satisfaction. That's a different statement to "the work itself didn't qualify." Genuinely qualifying work described thinly or evidenced weakly can come back reduced. It happens the other way too: work that never really cleared the uncertainty bar can be described so generically that it's impossible to tell either way, which is often exactly why it drew scrutiny in the first place. See R&D Tax Relief on why boilerplate narratives are the bigger risk factor.

Working out which one happened

Read what HMRC actually objected to, not the headline outcome

The letter or decision will usually point at something specific: a cost category disallowed, a project excluded, or the whole claim rejected on a procedural ground like a missed Additional Information Form. That specific objection is the starting point for everything after it. A claim reduced because certain subcontractor costs weren't properly evidenced is a completely different situation to one rejected because the work itself, on HMRC's reading, doesn't meet the uncertainty test. Don't skip past the detail to the number.

Something that catches people out: a reduction on one project inside a multi-project claim sometimes gets read as a verdict on the whole claim's credibility. It usually isn't. Claims covering several projects are assessed project by project, and one weak entry doesn't automatically undermine the others, though it's worth checking whether the same evidential gap exists elsewhere in the claim before assuming it doesn't.

Is it appealable

It depends on the ground for the decision, and the clock is short

Whether a rejection or reduction can be challenged, and how, depends on the specific ground HMRC gave and the stage the claim is at. Check the decision letter for the deadline: for most HMRC decisions you usually have 30 days from the date of the letter to appeal or accept a review (see gov.uk guidance on disagreeing with a tax decision). The right route varies by circumstance, and getting the process wrong can close off options that were otherwise open, so if a decision has just landed, talk to a specialist adviser before that deadline passes, not after.

The next period's claim

Whatever caused this one to fail usually needs fixing before the next is filed

If the objection was about evidence quality rather than eligibility, that's fixable going forward: better contemporaneous records, and a technical narrative written by someone who understands both the work and what HMRC is actually testing for. If it points at something more fundamental (whether the work meets the bar at all), that's worth an honest, specialist assessment before another claim goes in built the same way.

Decision helper

Your situationUsually fitsNot this
Claim reduced, evidence-based objectionRebuild the narrative and cost evidence for next timeAssuming the underlying work doesn't qualify
Claim rejected on a procedural groundCheck exactly what was missed before refilingFiling the next claim the same way
Unsure if a past claim was actually wrong, not just weakA proper review of that specific claimWaiting to see if HMRC raises it again

Alternatives and limitations

If an enquiry is still open, or an earlier claim worries you

If this outcome came from a formal enquiry that's still open on other points, see what happens during an HMRC enquiry. And if working through this has raised a wider concern (that a previous claim, this one or an earlier one, was built on shakier ground than you realised at the time), that's a different, proactive question. See unwinding a claim you suspect was wrong before HMRC gets there first.

Talk it through

Need another perspective?

Describe where things stand in a sentence or two, and we'll tell you whether it's something we can help with. There's no charge for this.

What happens next

  1. A person on our team reads it. A sentence or two is enough to start.
  2. If we can help, we introduce you to a specialist partner we have vetted and tell you who they are.
  3. No charge and no obligation at any point. You decide whether to go further.
Adam Parker

Adam Parker

Founder of Muswell Rose Consulting Ltd, which trades as Established Finance · former Managing Director of Penny, an invoice finance business, with 15+ years across mortgages, commercial finance and fintech lending.

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